› 5ome

X-ray diffraction
0.75Å resolution

The cryofrozen atomic resolution X-ray crystal structure of the reduced form (Fe2+) perdeuterated Pyrococcus furiosus Rubredoxin in D2O (100K, 0.75 Angstrom resolution)

Released:
DOI: 10.2210/pdb5ome/pdb
PDB entry 5ome coloured by chain, front view.
PDB entry 5ome coloured by chain, side view.
PDB entry 5ome coloured by chain, top view.
Source organism: Pyrococcus furiosus DSM 3638
Entry authors: Cuypers MG, Mason SA, Mossou E, Haertlein M, Mitchell EP, Forsyth VT

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150200 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rubredoxin Chain: A
Molecule details ›
Chain: A
Length: 54 amino acids
Theoretical weight: 6.03 KDa
Source organism: Pyrococcus furiosus DSM 3638
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'
UniProt:
  • Canonical: P24297 (Residues: 1-54; Coverage: 100%)
Gene names: PF1282, rub
Sequence domains: Rubredoxin
Structure domains: Rubrerythrin, domain 2

Ligands and Environments

3 bound ligands:
Ligand FE 1 x FE
Ligand NA 1 x NA
Ligand PO4 2 x PO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID29
Spacegroup: P212121
Unit cell:
a: 33.993Å b: 34.803Å c: 43.233Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.112 0.111 0.121
Expression system: Escherichia coli 'BL21-Gold(DE3)pLysS AG'

Quick links